Welcome to ETE’s documentation!

Contents:

• About
  • Highlighted Tools Using ETE
  • Related Links and Resources
• Tutorial
  • The Tree structure
  • Phylogenetic trees
  • Tree drawing and exploration (web)
  • Tree drawing (Qt)
  • Taxonomy databases
  • Tree matcher
• Reference Guide
  • Tree (main class)
  • Tree operations
  • Parsers
  • Phylogenetic trees
  • Multiple Sequence Alignments (SeqGroup)
  • Taxonomy databases
  • Smartview (web graphics)
  • Treeview (qt graphics)
  • Tree matcher
• Internals
  • Overview
  • Essentials
  • API
  • Detailed Layout
  • Drawing
  • Development
• Frequently Asked Questions
  • General
  • Tree Browsing
  • Reading and writing
  • Tree visualization
• Migrating from ETE 3
  • General considerations
  • Changes in syntax
  • New syntax
  • Changes in the ete4 tool

Indices and tables

• Index

• Module Index

• Search Page